STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114476449Methylcytosine dioxygenase TET3-like. (2118 aa)    
Predicted Functional Partners:
arid4b
AT-rich interaction domain 4B.
  
 0.865
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 0.807
ENSGWIP00000049643
annotation not available
   
 0.803
cxxc4
CXXC finger protein 4.
     
0.787
LOC114460555
CXXC-type zinc finger protein 5-like.
     
0.671
ENSGWIP00000036025
CXXC finger protein 5a.
     
0.671
dvl1
Dishevelled segment polarity protein 1.
    
 0.638
LOC114459826
Segment polarity protein dishevelled homolog DVL-3-like.
    
 0.638
ENSGWIP00000016582
annotation not available
    
 0.638
LOC114480676
Segment polarity protein dishevelled homolog DVL-2-like.
    
 0.638
Your Current Organism:
Gouania willdenowi
NCBI taxonomy Id: 441366
Other names: G. willdenowi, Lepadogaster willdenowi, blunt-snouted clingfish, chafaroccas
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.