STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMU_029270Uncharacterized protein. (632 aa)    
Predicted Functional Partners:
CMU_008020
Signal recognition particle 19 protein, putative.
    
 0.999
CMU_014190
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
   
 0.999
CMU_033660
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
 0.999
CMU_011790
Signal recognition particle receptor subunit alpha, putative.
   
 0.965
CMU_008240
Uncharacterized protein.
   
 
 0.946
CMU_024620
60S ribosomal protein L23a, putative; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.875
CMU_040280
60S ribosomal protein L3, putative; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.872
CMU_042510
60S ribosomal protein L35, putative.
   
 
 0.860
CMU_021050
60S ribosomal protein L26, putative.
    
 
 0.857
CMU_040910
60S ribosomal protein L13a, putative.
    
 
 0.850
Your Current Organism:
Cryptosporidium muris
NCBI taxonomy Id: 441375
Other names: C. muris RN66, Cryptosporidium muris RN66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.