Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mpop_1069KEGG: mex:Mext_1744 urate catabolism protein; TIGRFAM: OHCU decarboxylase; urate catabolism protein; PFAM: polysaccharide deacetylase. (470 aa)    
Predicted Functional Partners:
Mpop_3212
OHCU decarboxylase; TIGRFAM: hydroxyisourate hydrolase; OHCU decarboxylase; PFAM: Transthyretin; Hydroxyisourate hydrolase; KEGG: bja:bll6163 hypothetical protein.
 
 
0.981
Mpop_1071
PFAM: protein of unknown function DUF989; KEGG: mex:Mext_1742 protein of unknown function DUF989.
 
    0.855
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
  
 0.828
Mpop_1087
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.738
Mpop_1074
PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: mex:Mext_1739 tetracycline transcriptional regulator YcdC domain protein.
  
   
 0.630
Mpop_1080
KEGG: amr:AM1_0255 hypothetical protein.
  
  
 0.589
Mpop_1127
TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mex:Mext_1691 xanthine permease.
 
  
 0.521
Mpop_1072
TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_1741 allantoin catabolism protein.
 
     0.466
Mpop_4007
KEGG: mex:Mext_3752 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20.
 
   
 0.431
Mpop_4686
PFAM: glycosyl transferase family 39; KEGG: mex:Mext_4173 glycosyl transferase family 39.
  
  
 0.413
Your Current Organism:
Methylorubrum populi
NCBI taxonomy Id: 441620
Other names: M. populi BJ001, Methylobacterium populi BJ001, Methylobacterium sp. BJ001, Methylorubrum populi BJ001
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