Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
chrA2Chromate transporter; This protein contains five predicted transmembrane helices. (188 aa)    
Predicted Functional Partners:
chrA1
Chromate transporter; This protein contains six predicted transmembrane helices.
 
    
0.822
prfA
Peptide chain release factor RF-1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.769
ACL_0202
SAM-dependent methyltransferase, HemK family.
       0.769
ACL_0203
dsRNA binding, YrdC domain protein; Belongs to the SUA5 family.
       0.765
chrA
Chromate transport protein.
  
     0.759
ACL_0204
Translational GTPase, TypA/BipA type.
       0.563
dps
Starvation-inducible DNA-binding protein, ferritin-like protein; Belongs to the Dps family.
       0.555
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.429
ACL_0205
Sugar-phosphate isomerase, RpiB/LacA/LacB family.
       0.427
Your Current Organism:
Acholeplasma laidlawii
NCBI taxonomy Id: 441768
Other names: A. laidlawii PG-8A, Acholeplasma laidlawii PG-8A, Acholeplasma laidlawii str. PG-8A, Acholeplasma laidlawii strain PG-8A
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