Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACL_1007Hypothetical surface-anchored protein; This protein contains one predicted N-terminal transmembrane helix, and one C-terminal transmembrane helix with the extracellular loop in the middle. (197 aa)    
Predicted Functional Partners:
ACL_1010
Hypothetical surface-anchored protein; This protein contains one predicted N-terminal transmembrane helix, and one C-terminal transmembrane helix with the extracellular loop in the middle.
 
  
  0.986
ACL_1008
Hypothetical protein.
 
     0.920
ACL_0175
Hypothetical protein.
     
  0.900
ACL_1166
Hypothetical surface-anchored protein; This protein contains one predicted N-terminal transmembrane helix, and one C-terminal transmembrane helix with the extracellular loop in the middle.
     
  0.900
ACL_1009
Hypothetical surface-anchored protein; This protein contains three predicted N-terminal transmembrane helices.
 
     0.759
ACL_1409
Hypothetical surface-anchored protein; This protein contains one predicted N-terminal transmembrane helix.
 
    0.724
ACL_0866
EAL domain is found in diverse bacterial signaling proteins.
  
     0.722
ACL_0140
Hypothetical surface-anchored protein; This protein contains one predicted N-terminal transmembrane domain.
  
     0.713
ACL_0725
Hypothetical protein.
  
   
 0.705
ACL_1119
Large hypothetical protein.
  
     0.700
Your Current Organism:
Acholeplasma laidlawii
NCBI taxonomy Id: 441768
Other names: A. laidlawii PG-8A, Acholeplasma laidlawii PG-8A, Acholeplasma laidlawii str. PG-8A, Acholeplasma laidlawii strain PG-8A
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