Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASPHD2 | HPS6 | ENSSCUP00000000221 | ENSSCUP00000002519 | Aspartate beta-hydroxylase domain-containing protein 2. | Hermansky-Pudlak syndrome 6 protein. | 0.406 |
ASPHD2 | SRRD | ENSSCUP00000000221 | ENSSCUP00000000223 | Aspartate beta-hydroxylase domain-containing protein 2. | SRR1-like. | 0.548 |
ASPHD2 | TPST2 | ENSSCUP00000000221 | ENSSCUP00000000225 | Aspartate beta-hydroxylase domain-containing protein 2. | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | 0.405 |
ENSSCUP00000008352 | SRRD | ENSSCUP00000008352 | ENSSCUP00000000223 | annotation not available | SRR1-like. | 0.565 |
HPS6 | ASPHD2 | ENSSCUP00000002519 | ENSSCUP00000000221 | Hermansky-Pudlak syndrome 6 protein. | Aspartate beta-hydroxylase domain-containing protein 2. | 0.406 |
HPS6 | SRRD | ENSSCUP00000002519 | ENSSCUP00000000223 | Hermansky-Pudlak syndrome 6 protein. | SRR1-like. | 0.408 |
SRRD | ASPHD2 | ENSSCUP00000000223 | ENSSCUP00000000221 | SRR1-like. | Aspartate beta-hydroxylase domain-containing protein 2. | 0.548 |
SRRD | ENSSCUP00000008352 | ENSSCUP00000000223 | ENSSCUP00000008352 | SRR1-like. | annotation not available | 0.565 |
SRRD | HPS6 | ENSSCUP00000000223 | ENSSCUP00000002519 | SRR1-like. | Hermansky-Pudlak syndrome 6 protein. | 0.408 |
SRRD | TPST2 | ENSSCUP00000000223 | ENSSCUP00000000225 | SRR1-like. | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | 0.408 |
TPST2 | ASPHD2 | ENSSCUP00000000225 | ENSSCUP00000000221 | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | Aspartate beta-hydroxylase domain-containing protein 2. | 0.405 |
TPST2 | SRRD | ENSSCUP00000000225 | ENSSCUP00000000223 | Protein-tyrosine sulfotransferase; Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate; Belongs to the protein sulfotransferase family. | SRR1-like. | 0.408 |