Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLSPN | USP25 | ENSSCUP00000018495 | ENSSCUP00000000381 | Claspin. | Ubiquitin specific peptidase 25. | 0.724 |
ENSSCUP00000013676 | USP25 | ENSSCUP00000013676 | ENSSCUP00000000381 | annotation not available | Ubiquitin specific peptidase 25. | 0.714 |
N308_02498 | N308_04198 | ENSSCUP00000009821 | ENSSCUP00000005173 | Ubiquitin-40S ribosomal protein S27a. | Polyubiquitin. | 0.998 |
N308_02498 | OASL | ENSSCUP00000009821 | ENSSCUP00000008856 | Ubiquitin-40S ribosomal protein S27a. | 2'-5'-oligoadenylate synthase-like 2. | 0.935 |
N308_02498 | TRIP12 | ENSSCUP00000009821 | ENSSCUP00000024869 | Ubiquitin-40S ribosomal protein S27a. | E3 ubiquitin-protein ligase TRIP12. | 0.910 |
N308_02498 | UBA52 | ENSSCUP00000009821 | ENSSCUP00000002422 | Ubiquitin-40S ribosomal protein S27a. | Ubiquitin-60S ribosomal protein L40. | 0.999 |
N308_02498 | USP13 | ENSSCUP00000009821 | ENSSCUP00000023659 | Ubiquitin-40S ribosomal protein S27a. | Ubiquitin carboxyl-terminal hydrolase. | 0.919 |
N308_02498 | USP25 | ENSSCUP00000009821 | ENSSCUP00000000381 | Ubiquitin-40S ribosomal protein S27a. | Ubiquitin specific peptidase 25. | 0.847 |
N308_02498 | ZFAND4 | ENSSCUP00000009821 | ENSSCUP00000014270 | Ubiquitin-40S ribosomal protein S27a. | AN1-type zinc finger protein 4. | 0.999 |
N308_04198 | N308_02498 | ENSSCUP00000005173 | ENSSCUP00000009821 | Polyubiquitin. | Ubiquitin-40S ribosomal protein S27a. | 0.998 |
N308_04198 | TRIP12 | ENSSCUP00000005173 | ENSSCUP00000024869 | Polyubiquitin. | E3 ubiquitin-protein ligase TRIP12. | 0.996 |
N308_04198 | UBA52 | ENSSCUP00000005173 | ENSSCUP00000002422 | Polyubiquitin. | Ubiquitin-60S ribosomal protein L40. | 0.999 |
N308_04198 | USP13 | ENSSCUP00000005173 | ENSSCUP00000023659 | Polyubiquitin. | Ubiquitin carboxyl-terminal hydrolase. | 0.953 |
N308_04198 | USP25 | ENSSCUP00000005173 | ENSSCUP00000000381 | Polyubiquitin. | Ubiquitin specific peptidase 25. | 0.889 |
N308_04198 | ZFAND4 | ENSSCUP00000005173 | ENSSCUP00000014270 | Polyubiquitin. | AN1-type zinc finger protein 4. | 0.551 |
OASL | N308_02498 | ENSSCUP00000008856 | ENSSCUP00000009821 | 2'-5'-oligoadenylate synthase-like 2. | Ubiquitin-40S ribosomal protein S27a. | 0.935 |
OASL | TRIP12 | ENSSCUP00000008856 | ENSSCUP00000024869 | 2'-5'-oligoadenylate synthase-like 2. | E3 ubiquitin-protein ligase TRIP12. | 0.996 |
OASL | UBA52 | ENSSCUP00000008856 | ENSSCUP00000002422 | 2'-5'-oligoadenylate synthase-like 2. | Ubiquitin-60S ribosomal protein L40. | 0.949 |
OASL | USP13 | ENSSCUP00000008856 | ENSSCUP00000023659 | 2'-5'-oligoadenylate synthase-like 2. | Ubiquitin carboxyl-terminal hydrolase. | 0.868 |
OASL | USP25 | ENSSCUP00000008856 | ENSSCUP00000000381 | 2'-5'-oligoadenylate synthase-like 2. | Ubiquitin specific peptidase 25. | 0.733 |
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