Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AK9 | KDM6A | ENSSCUP00000012175 | ENSSCUP00000019824 | Adenylate kinase 9; Belongs to the adenylate kinase family. | Lysine-specific demethylase 6A. | 0.925 |
AK9 | MRPS10 | ENSSCUP00000012175 | ENSSCUP00000009228 | Adenylate kinase 9; Belongs to the adenylate kinase family. | Ribosomal_S10 domain-containing protein. | 0.548 |
AK9 | NACC2 | ENSSCUP00000012175 | ENSSCUP00000003059 | Adenylate kinase 9; Belongs to the adenylate kinase family. | Nucleus accumbens-associated protein 2. | 0.878 |
AK9 | NME8 | ENSSCUP00000012175 | ENSSCUP00000020556 | Adenylate kinase 9; Belongs to the adenylate kinase family. | Thioredoxin domain-containing protein 3. | 0.952 |
AK9 | POLR2C | ENSSCUP00000012175 | ENSSCUP00000001761 | Adenylate kinase 9; Belongs to the adenylate kinase family. | DNA-directed RNA polymerase II subunit RPB3. | 0.655 |
AK9 | RPS2 | ENSSCUP00000012175 | ENSSCUP00000001718 | Adenylate kinase 9; Belongs to the adenylate kinase family. | 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.644 |
ARID4B | BARD1 | ENSSCUP00000000737 | ENSSCUP00000018062 | AT-rich interaction domain 4B. | BRCA1-associated RING domain protein 1. | 0.438 |
ARID4B | KDM6A | ENSSCUP00000000737 | ENSSCUP00000019824 | AT-rich interaction domain 4B. | Lysine-specific demethylase 6A. | 0.696 |
ARID4B | NACC2 | ENSSCUP00000000737 | ENSSCUP00000003059 | AT-rich interaction domain 4B. | Nucleus accumbens-associated protein 2. | 0.544 |
BARD1 | ARID4B | ENSSCUP00000018062 | ENSSCUP00000000737 | BRCA1-associated RING domain protein 1. | AT-rich interaction domain 4B. | 0.438 |
BARD1 | KDM6A | ENSSCUP00000018062 | ENSSCUP00000019824 | BRCA1-associated RING domain protein 1. | Lysine-specific demethylase 6A. | 0.515 |
BARD1 | NACC2 | ENSSCUP00000018062 | ENSSCUP00000003059 | BRCA1-associated RING domain protein 1. | Nucleus accumbens-associated protein 2. | 0.514 |
CYB5R4 | KDM6A | ENSSCUP00000002771 | ENSSCUP00000019824 | Cytochrome b5 reductase 4. | Lysine-specific demethylase 6A. | 0.639 |
CYB5R4 | NACC2 | ENSSCUP00000002771 | ENSSCUP00000003059 | Cytochrome b5 reductase 4. | Nucleus accumbens-associated protein 2. | 0.532 |
CYB5R4 | NME8 | ENSSCUP00000002771 | ENSSCUP00000020556 | Cytochrome b5 reductase 4. | Thioredoxin domain-containing protein 3. | 0.913 |
KDM6A | AK9 | ENSSCUP00000019824 | ENSSCUP00000012175 | Lysine-specific demethylase 6A. | Adenylate kinase 9; Belongs to the adenylate kinase family. | 0.925 |
KDM6A | ARID4B | ENSSCUP00000019824 | ENSSCUP00000000737 | Lysine-specific demethylase 6A. | AT-rich interaction domain 4B. | 0.696 |
KDM6A | BARD1 | ENSSCUP00000019824 | ENSSCUP00000018062 | Lysine-specific demethylase 6A. | BRCA1-associated RING domain protein 1. | 0.515 |
KDM6A | CYB5R4 | ENSSCUP00000019824 | ENSSCUP00000002771 | Lysine-specific demethylase 6A. | Cytochrome b5 reductase 4. | 0.639 |
KDM6A | MRPS10 | ENSSCUP00000019824 | ENSSCUP00000009228 | Lysine-specific demethylase 6A. | Ribosomal_S10 domain-containing protein. | 0.554 |
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