STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP48Ubiquitin carboxyl-terminal hydrolase 48. (1026 aa)    
Predicted Functional Partners:
N308_02498
Ubiquitin-40S ribosomal protein S27a.
    
 0.841
UBA52
Ubiquitin-60S ribosomal protein L40.
    
 0.834
TRIP12
E3 ubiquitin-protein ligase TRIP12.
   
 
 0.820
TRAF2
TNF receptor associated factor 2.
    
 0.801
N308_04198
Polyubiquitin.
   
 0.733
OASL
2'-5'-oligoadenylate synthase-like 2.
   
 0.733
ZFAND4
AN1-type zinc finger protein 4.
   
 0.733
UVSSA
UV-stimulated scaffold protein A.
    
 0.720
TRAF5
TNF receptor associated factor 5.
    
 0.697
TRAF3
TNF receptor-associated factor 3.
    
 0.697
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.