STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104139569Lethal(3)malignant brain tumor-like 3. (800 aa)    
Predicted Functional Partners:
RNF2
E3 ubiquitin-protein ligase RING2.
    
 0.750
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.648
RYBP
RING1 and YY1-binding protein.
    
 0.627
YAF2
YY1-associated factor 2.
    
 0.627
CBX8
Chromobox protein 8.
    
 0.620
CBX4
E3 SUMO-protein ligase CBX4.
    
 0.598
EED
Polycomb protein EED.
   
 0.587
CBX3
Chromobox protein 3.
    
 0.582
PCGF6
Polycomb group RING finger protein 6.
    
 0.581
ENSSCUP00000007497
annotation not available
    
 0.581
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.