STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF4E3 ubiquitin-protein ligase MARCH4. (316 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.664
FAF2
FAS-associated factor 2.
    
 
 0.564
FAF1
FAS-associated factor 1.
    
 
 0.564
ENSSCUP00000017659
annotation not available
   
 
  0.538
SPATA5
Spermatogenesis-associated protein 5.
    
 
 0.509
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.509
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.509
RRP15
RRP15-like.
      
 0.502
C1QTNF12
Protein FAM132A.
    
 
 0.476
UBE2J2
Ubiquitin-conjugating enzyme E2 J2.
    
 
 0.476
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.