STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104154189Lysine-specific demethylase 4C. (784 aa)    
Predicted Functional Partners:
ENSSCUP00000002474
annotation not available
 
      0.893
N308_14423
Lysine-specific demethylase 4B.
 
      0.892
LOC104137772
Histone H4-like.
    
 0.625
LOC104145814
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.625
ENSSCUP00000002809
annotation not available
    
 0.623
H3-3A
Histone H3.3.
    
 0.623
N308_05160
Histone H3; Belongs to the histone H3 family.
    
 0.623
ENSSCUP00000020850
annotation not available
    
 0.623
ENSSCUP00000000036
annotation not available
    
 0.592
ENSSCUP00000020834
annotation not available
    
 0.592
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.