Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID1A | ARID1B | ENSSCUP00000020054 | ENSSCUP00000025329 | AT-rich interactive domain-containing protein 1A. | AT-rich interactive domain-containing protein 1B. | 0.418 |
ARID1A | JMJD1C | ENSSCUP00000020054 | ENSSCUP00000009999 | AT-rich interactive domain-containing protein 1A. | Putative JmjC domain-containing histone demethylation protein 2C. | 0.593 |
ARID1A | MYSM1 | ENSSCUP00000020054 | ENSSCUP00000005227 | AT-rich interactive domain-containing protein 1A. | Histone H2A deubiquitinase MYSM1. | 0.919 |
ARID1A | PPARA | ENSSCUP00000020054 | ENSSCUP00000014930 | AT-rich interactive domain-containing protein 1A. | Peroxisome proliferator-activated receptor alpha. | 0.665 |
ARID1A | PPARG | ENSSCUP00000020054 | ENSSCUP00000020482 | AT-rich interactive domain-containing protein 1A. | Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] | 0.806 |
ARID1A | SMARCB1 | ENSSCUP00000020054 | ENSSCUP00000025780 | AT-rich interactive domain-containing protein 1A. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. | 0.973 |
ARID1A | SMARCC1 | ENSSCUP00000020054 | ENSSCUP00000024716 | AT-rich interactive domain-containing protein 1A. | SWI/SNF complex subunit SMARCC1. | 0.982 |
ARID1B | ARID1A | ENSSCUP00000025329 | ENSSCUP00000020054 | AT-rich interactive domain-containing protein 1B. | AT-rich interactive domain-containing protein 1A. | 0.418 |
ARID1B | JMJD1C | ENSSCUP00000025329 | ENSSCUP00000009999 | AT-rich interactive domain-containing protein 1B. | Putative JmjC domain-containing histone demethylation protein 2C. | 0.593 |
ARID1B | MYSM1 | ENSSCUP00000025329 | ENSSCUP00000005227 | AT-rich interactive domain-containing protein 1B. | Histone H2A deubiquitinase MYSM1. | 0.919 |
ARID1B | PPARA | ENSSCUP00000025329 | ENSSCUP00000014930 | AT-rich interactive domain-containing protein 1B. | Peroxisome proliferator-activated receptor alpha. | 0.665 |
ARID1B | PPARG | ENSSCUP00000025329 | ENSSCUP00000020482 | AT-rich interactive domain-containing protein 1B. | Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] | 0.806 |
ARID1B | SMARCB1 | ENSSCUP00000025329 | ENSSCUP00000025780 | AT-rich interactive domain-containing protein 1B. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. | 0.973 |
ARID1B | SMARCC1 | ENSSCUP00000025329 | ENSSCUP00000024716 | AT-rich interactive domain-containing protein 1B. | SWI/SNF complex subunit SMARCC1. | 0.982 |
ENSSCUP00000017052 | JMJD1C | ENSSCUP00000017052 | ENSSCUP00000009999 | annotation not available | Putative JmjC domain-containing histone demethylation protein 2C. | 0.572 |
ENSSCUP00000017052 | PPARA | ENSSCUP00000017052 | ENSSCUP00000014930 | annotation not available | Peroxisome proliferator-activated receptor alpha. | 0.785 |
ENSSCUP00000017052 | PPARG | ENSSCUP00000017052 | ENSSCUP00000020482 | annotation not available | Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] | 0.644 |
JMJD1C | ARID1A | ENSSCUP00000009999 | ENSSCUP00000020054 | Putative JmjC domain-containing histone demethylation protein 2C. | AT-rich interactive domain-containing protein 1A. | 0.593 |
JMJD1C | ARID1B | ENSSCUP00000009999 | ENSSCUP00000025329 | Putative JmjC domain-containing histone demethylation protein 2C. | AT-rich interactive domain-containing protein 1B. | 0.593 |
JMJD1C | ENSSCUP00000017052 | ENSSCUP00000009999 | ENSSCUP00000017052 | Putative JmjC domain-containing histone demethylation protein 2C. | annotation not available | 0.572 |
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