STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N308_13166RING finger protein 38. (409 aa)    
Predicted Functional Partners:
N308_02498
Ubiquitin-40S ribosomal protein S27a.
    
 0.887
N308_04198
Polyubiquitin.
    
 0.881
UBA52
Ubiquitin-60S ribosomal protein L40.
    
 0.879
UBE2K
Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.767
SMAD7
Mothers against decapentaplegic 7.
   
 0.739
ENSSCUP00000011725
annotation not available
   
 0.704
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.671
ZFAND4
AN1-type zinc finger protein 4.
   
 0.663
OASL
2'-5'-oligoadenylate synthase-like 2.
   
 0.599
UBE2D1
Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.592
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.