STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N308_15162Serine palmitoyltransferase 2. (381 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1.
  
0.957
KDSR
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.832
SORD
Sorbitol dehydrogenase.
  
 
 0.822
N308_15413
Phenylserine dehydratase.
   
 0.811
N308_00558
Serine racemase.
   
 0.807
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
    
 0.793
EPRS1
Bifunctional glutamate/proline--tRNA ligase.
   
 0.793
PSPH
Phosphoserine phosphatase.
    
 0.789
SPTLC3
Serine palmitoyltransferase 3.
  
  
 
0.777
GCAT
Aminotran_1_2 domain-containing protein.
  
  
  0.774
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.