STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13BCoagulation factor XIII B chain. (638 aa)    
Predicted Functional Partners:
F2
Prothrombin; Belongs to the peptidase S1 family.
   
 0.892
F13A1
Coagulation factor XIII A chain.
    
 0.869
TGM4
Protein-glutamine gamma-glutamyltransferase 4.
    
 0.869
FGG
Fibrinogen gamma chain.
   
 0.866
HRG
Histidine rich glycoprotein.
   
 0.856
HGD
Homogentisate 1,2-dioxygenase.
   
    0.837
SERPIND1
Heparin cofactor 2; Belongs to the serpin family.
   
 
 0.811
FGB
Fibrinogen C-terminal domain-containing protein.
   
 0.810
ENSSCUP00000013227
annotation not available
   
 0.789
AGXT2
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
    0.781
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.