Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DENR | MARS1 | ENSSCUP00000005014 | ENSSCUP00000011696 | Density-regulated protein; Belongs to the DENR family. | Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.404 |
DENR | MFF | ENSSCUP00000005014 | ENSSCUP00000013565 | Density-regulated protein; Belongs to the DENR family. | Mitochondrial fission factor. | 0.639 |
DNM1L | MFF | ENSSCUP00000024052 | ENSSCUP00000013565 | Dynamin-1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Mitochondrial fission factor. | 0.844 |
DNM1L | MFN1 | ENSSCUP00000024052 | ENSSCUP00000023604 | Dynamin-1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Mitofusin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.730 |
ITGA1 | ITGA3 | ENSSCUP00000016095 | ENSSCUP00000025143 | Integrin alpha-1; Belongs to the integrin alpha chain family. | Integrin alpha-3. | 0.673 |
ITGA1 | LAMC1 | ENSSCUP00000016095 | ENSSCUP00000006599 | Integrin alpha-1; Belongs to the integrin alpha chain family. | Laminin subunit gamma 1. | 0.879 |
ITGA1 | LAMC2 | ENSSCUP00000016095 | ENSSCUP00000006596 | Integrin alpha-1; Belongs to the integrin alpha chain family. | Laminin subunit gamma-2. | 0.869 |
ITGA1 | MFF | ENSSCUP00000016095 | ENSSCUP00000013565 | Integrin alpha-1; Belongs to the integrin alpha chain family. | Mitochondrial fission factor. | 0.700 |
ITGA1 | N308_11656 | ENSSCUP00000016095 | ENSSCUP00000003227 | Integrin alpha-1; Belongs to the integrin alpha chain family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.474 |
ITGA3 | ITGA1 | ENSSCUP00000025143 | ENSSCUP00000016095 | Integrin alpha-3. | Integrin alpha-1; Belongs to the integrin alpha chain family. | 0.673 |
ITGA3 | LAMC1 | ENSSCUP00000025143 | ENSSCUP00000006599 | Integrin alpha-3. | Laminin subunit gamma 1. | 0.914 |
ITGA3 | LAMC2 | ENSSCUP00000025143 | ENSSCUP00000006596 | Integrin alpha-3. | Laminin subunit gamma-2. | 0.915 |
ITGA3 | MFF | ENSSCUP00000025143 | ENSSCUP00000013565 | Integrin alpha-3. | Mitochondrial fission factor. | 0.700 |
ITGA3 | N308_11656 | ENSSCUP00000025143 | ENSSCUP00000003227 | Integrin alpha-3. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.565 |
LAMC1 | ITGA1 | ENSSCUP00000006599 | ENSSCUP00000016095 | Laminin subunit gamma 1. | Integrin alpha-1; Belongs to the integrin alpha chain family. | 0.879 |
LAMC1 | ITGA3 | ENSSCUP00000006599 | ENSSCUP00000025143 | Laminin subunit gamma 1. | Integrin alpha-3. | 0.914 |
LAMC1 | LAMC2 | ENSSCUP00000006599 | ENSSCUP00000006596 | Laminin subunit gamma 1. | Laminin subunit gamma-2. | 0.838 |
LAMC1 | MFF | ENSSCUP00000006599 | ENSSCUP00000013565 | Laminin subunit gamma 1. | Mitochondrial fission factor. | 0.609 |
LAMC2 | ITGA1 | ENSSCUP00000006596 | ENSSCUP00000016095 | Laminin subunit gamma-2. | Integrin alpha-1; Belongs to the integrin alpha chain family. | 0.869 |
LAMC2 | ITGA3 | ENSSCUP00000006596 | ENSSCUP00000025143 | Laminin subunit gamma-2. | Integrin alpha-3. | 0.915 |
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