Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHD3 | RBSN | ENSSCUP00000004054 | ENSSCUP00000017745 | EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Rabenosyn-5. | 0.945 |
EHD3 | VPS45 | ENSSCUP00000004054 | ENSSCUP00000006152 | EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.583 |
EHD3 | WDFY4 | ENSSCUP00000004054 | ENSSCUP00000014216 | EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | WDFY family member 4. | 0.854 |
EHD4 | RBSN | ENSSCUP00000024080 | ENSSCUP00000017745 | EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Rabenosyn-5. | 0.925 |
EHD4 | VPS45 | ENSSCUP00000024080 | ENSSCUP00000006152 | EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.583 |
EHD4 | WDFY4 | ENSSCUP00000024080 | ENSSCUP00000014216 | EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | WDFY family member 4. | 0.854 |
PLEKHM3 | WDFY4 | ENSSCUP00000012476 | ENSSCUP00000014216 | Pleckstrin homology domain-containing family M member 3. | WDFY family member 4. | 0.845 |
RBSN | EHD3 | ENSSCUP00000017745 | ENSSCUP00000004054 | Rabenosyn-5. | EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.945 |
RBSN | EHD4 | ENSSCUP00000017745 | ENSSCUP00000024080 | Rabenosyn-5. | EH domain-containing protein 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.925 |
RBSN | SRL | ENSSCUP00000017745 | ENSSCUP00000011885 | Rabenosyn-5. | Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.854 |
RBSN | VPS45 | ENSSCUP00000017745 | ENSSCUP00000006152 | Rabenosyn-5. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.996 |
RBSN | WDFY4 | ENSSCUP00000017745 | ENSSCUP00000014216 | Rabenosyn-5. | WDFY family member 4. | 0.853 |
RUBCN | WDFY4 | ENSSCUP00000018738 | ENSSCUP00000014216 | Run domain Beclin-1 interacting and cysteine-rich containing protein. | WDFY family member 4. | 0.859 |
RUFY2 | RUFY3 | ENSSCUP00000001302 | ENSSCUP00000025544 | RUN and FYVE domain containing 2. | Protein RUFY3. | 0.417 |
RUFY2 | WDFY4 | ENSSCUP00000001302 | ENSSCUP00000014216 | RUN and FYVE domain containing 2. | WDFY family member 4. | 0.849 |
RUFY3 | RUFY2 | ENSSCUP00000025544 | ENSSCUP00000001302 | Protein RUFY3. | RUN and FYVE domain containing 2. | 0.417 |
RUFY3 | WDFY4 | ENSSCUP00000025544 | ENSSCUP00000014216 | Protein RUFY3. | WDFY family member 4. | 0.849 |
RUNDC3B | WDFY4 | ENSSCUP00000012926 | ENSSCUP00000014216 | RUN domain-containing protein 3B. | WDFY family member 4. | 0.845 |
SRL | RBSN | ENSSCUP00000011885 | ENSSCUP00000017745 | Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Rabenosyn-5. | 0.854 |
SRL | VPS45 | ENSSCUP00000011885 | ENSSCUP00000006152 | Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.490 |
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