STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKS1Meckel syndrome type 1 protein. (542 aa)    
Predicted Functional Partners:
B9D1
B9 domain-containing protein 1.
    
0.932
CC2D2A
Coiled-coil and C2 domain-containing protein 2A.
    
 0.912
TCTN3
Tectonic-3.
    
 0.894
TMEM67
Meckelin.
     
 0.875
AHI1
Abelson helper integration site 1.
    
 0.866
TMEM216
Transmembrane protein 216.
     
 0.853
ENSSCUP00000022970
annotation not available
    
 0.838
TCTN2
Tectonic-2.
     
 0.811
TMEM80
Transmembrane protein 80.
     
 0.774
TMEM231
Transmembrane protein 231.
    
 
 0.708
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.