Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CENPI | DCLK1 | ENSSCUP00000026179 | ENSSCUP00000018119 | Centromere protein I. | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | 0.768 |
CENPI | DCX | ENSSCUP00000026179 | ENSSCUP00000025260 | Centromere protein I. | Neuronal migration protein doublecortin. | 0.638 |
CHEK2 | DCLK1 | ENSSCUP00000013042 | ENSSCUP00000018119 | Serine/threonine-protein kinase Chk2. | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | 0.865 |
DCLK1 | CENPI | ENSSCUP00000018119 | ENSSCUP00000026179 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Centromere protein I. | 0.768 |
DCLK1 | CHEK2 | ENSSCUP00000018119 | ENSSCUP00000013042 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Serine/threonine-protein kinase Chk2. | 0.865 |
DCLK1 | DCX | ENSSCUP00000018119 | ENSSCUP00000025260 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Neuronal migration protein doublecortin. | 0.755 |
DCLK1 | ENSSCUP00000001950 | ENSSCUP00000018119 | ENSSCUP00000001950 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | annotation not available | 0.768 |
DCLK1 | MC1R | ENSSCUP00000018119 | ENSSCUP00000005972 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Melanocortin 1 receptor. | 0.911 |
DCLK1 | N308_02301 | ENSSCUP00000018119 | ENSSCUP00000005975 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.911 |
DCLK1 | N308_08783 | ENSSCUP00000018119 | ENSSCUP00000020141 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.768 |
DCLK1 | TUBB1 | ENSSCUP00000018119 | ENSSCUP00000003579 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.768 |
DCLK1 | TUBB2A | ENSSCUP00000018119 | ENSSCUP00000014728 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.768 |
DCLK1 | TUBE1 | ENSSCUP00000018119 | ENSSCUP00000021405 | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | Tubulin epsilon chain; Belongs to the tubulin family. | 0.768 |
DCX | CENPI | ENSSCUP00000025260 | ENSSCUP00000026179 | Neuronal migration protein doublecortin. | Centromere protein I. | 0.638 |
DCX | DCLK1 | ENSSCUP00000025260 | ENSSCUP00000018119 | Neuronal migration protein doublecortin. | Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily. | 0.755 |
DCX | ENSSCUP00000001950 | ENSSCUP00000025260 | ENSSCUP00000001950 | Neuronal migration protein doublecortin. | annotation not available | 0.638 |
DCX | MC1R | ENSSCUP00000025260 | ENSSCUP00000005972 | Neuronal migration protein doublecortin. | Melanocortin 1 receptor. | 0.459 |
DCX | N308_02301 | ENSSCUP00000025260 | ENSSCUP00000005975 | Neuronal migration protein doublecortin. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.677 |
DCX | N308_08783 | ENSSCUP00000025260 | ENSSCUP00000020141 | Neuronal migration protein doublecortin. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. | 0.677 |
DCX | TUBB1 | ENSSCUP00000025260 | ENSSCUP00000003579 | Neuronal migration protein doublecortin. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.677 |
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