Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AK9 | N308_03611 | ENSSCUP00000012175 | ENSSCUP00000019303 | Adenylate kinase 9; Belongs to the adenylate kinase family. | Nephrocystin-3. | 0.837 |
ARL3 | CABP1 | ENSSCUP00000002637 | ENSSCUP00000025909 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Calcium binding protein 1. | 0.898 |
ARL3 | N308_03611 | ENSSCUP00000002637 | ENSSCUP00000019303 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Nephrocystin-3. | 0.757 |
ARL3 | UNC119 | ENSSCUP00000002637 | ENSSCUP00000000108 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Protein unc-119 A. | 0.988 |
ARL3 | UNC119B | ENSSCUP00000002637 | ENSSCUP00000025906 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Unc-119 lipid binding chaperone B. | 0.860 |
CABP1 | ARL3 | ENSSCUP00000025909 | ENSSCUP00000002637 | Calcium binding protein 1. | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | 0.898 |
CABP1 | N308_03611 | ENSSCUP00000025909 | ENSSCUP00000019303 | Calcium binding protein 1. | Nephrocystin-3. | 0.799 |
CABP1 | UNC119 | ENSSCUP00000025909 | ENSSCUP00000000108 | Calcium binding protein 1. | Protein unc-119 A. | 0.500 |
HAS2 | LEO1 | ENSSCUP00000002185 | ENSSCUP00000019436 | Hyaluronan synthase 2. | RNA polymerase-associated protein LEO1. | 0.504 |
HAS2 | N308_03611 | ENSSCUP00000002185 | ENSSCUP00000019303 | Hyaluronan synthase 2. | Nephrocystin-3. | 0.766 |
KIF5A | N308_03611 | ENSSCUP00000024844 | ENSSCUP00000019303 | Kinesin family member 5A. | Nephrocystin-3. | 0.851 |
KIF5B | KIF5C | ENSSCUP00000020525 | ENSSCUP00000004834 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.838 |
KIF5B | N308_03611 | ENSSCUP00000020525 | ENSSCUP00000019303 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Nephrocystin-3. | 0.851 |
KIF5C | KIF5B | ENSSCUP00000004834 | ENSSCUP00000020525 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.838 |
KIF5C | N308_03611 | ENSSCUP00000004834 | ENSSCUP00000019303 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Nephrocystin-3. | 0.851 |
LEO1 | HAS2 | ENSSCUP00000019436 | ENSSCUP00000002185 | RNA polymerase-associated protein LEO1. | Hyaluronan synthase 2. | 0.504 |
LEO1 | N308_03611 | ENSSCUP00000019436 | ENSSCUP00000019303 | RNA polymerase-associated protein LEO1. | Nephrocystin-3. | 0.914 |
N308_03611 | AK9 | ENSSCUP00000019303 | ENSSCUP00000012175 | Nephrocystin-3. | Adenylate kinase 9; Belongs to the adenylate kinase family. | 0.837 |
N308_03611 | ARL3 | ENSSCUP00000019303 | ENSSCUP00000002637 | Nephrocystin-3. | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | 0.757 |
N308_03611 | CABP1 | ENSSCUP00000019303 | ENSSCUP00000025909 | Nephrocystin-3. | Calcium binding protein 1. | 0.799 |
page 1 of 2