STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N308_01870Complement C1q and tumor necrosis factor-related protein 9A. (246 aa)    
Predicted Functional Partners:
MC1R
Melanocortin 1 receptor.
    
 0.482
N308_02301
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.482
N308_02498
Ubiquitin-40S ribosomal protein S27a.
    
  0.476
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.457
SETDB2
Histone-lysine N-methyltransferase SETDB2.
    
  0.457
UBA52
Ubiquitin-60S ribosomal protein L40.
    
  0.453
WDR18
WD repeat-containing protein 18.
    
  0.440
MYSM1
Histone H2A deubiquitinase MYSM1.
    
 0.439
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
  0.426
TAF12
Transcription initiation factor TFIID subunit 12.
    
  0.426
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.