STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVL9Late secretory pathway protein AVL9. (661 aa)    
Predicted Functional Partners:
RAB30
Ras-related protein Rab-30.
      
 0.563
RAB33B
RAB33B, member RAS oncogene family.
      
 0.540
DENND11
Protein LCHN.
      
 0.533
RAB33A
Ras-related protein Rab-33A.
      
 0.521
DENND6A
Protein DENND6A.
      
 0.517
DENND5A
DENN domain containing 5A.
      
 0.502
KBTBD2
Kelch repeat and BTB domain-containing protein 2.
      
 0.499
N308_14965
Protein RIC1.
      
 0.429
N308_06980
Protein RIC1.
      
 0.429
DENND4A
C-myc promoter-binding protein.
      
 0.410
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.