Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSCUP00000000044 | RIMS2 | ENSSCUP00000000044 | ENSSCUP00000019889 | annotation not available | Regulating synaptic membrane exocytosis 2. | 0.995 |
ENSSCUP00000000044 | SYT17 | ENSSCUP00000000044 | ENSSCUP00000021501 | annotation not available | Synaptotagmin-17. | 0.501 |
ENSSCUP00000000044 | VAMP4 | ENSSCUP00000000044 | ENSSCUP00000007560 | annotation not available | Vesicle-associated membrane protein 4. | 0.550 |
ITSN1 | ITSN2 | ENSSCUP00000005619 | ENSSCUP00000017407 | Intersectin-1. | Intersectin 2. | 0.980 |
ITSN1 | RIMS2 | ENSSCUP00000005619 | ENSSCUP00000019889 | Intersectin-1. | Regulating synaptic membrane exocytosis 2. | 0.621 |
ITSN1 | STON2 | ENSSCUP00000005619 | ENSSCUP00000010331 | Intersectin-1. | Stonin-2; Belongs to the Stoned B family. | 0.991 |
ITSN1 | SYT17 | ENSSCUP00000005619 | ENSSCUP00000021501 | Intersectin-1. | Synaptotagmin-17. | 0.571 |
ITSN1 | VAMP4 | ENSSCUP00000005619 | ENSSCUP00000007560 | Intersectin-1. | Vesicle-associated membrane protein 4. | 0.742 |
ITSN2 | ITSN1 | ENSSCUP00000017407 | ENSSCUP00000005619 | Intersectin 2. | Intersectin-1. | 0.980 |
ITSN2 | RIMS2 | ENSSCUP00000017407 | ENSSCUP00000019889 | Intersectin 2. | Regulating synaptic membrane exocytosis 2. | 0.621 |
ITSN2 | SH3RF3 | ENSSCUP00000017407 | ENSSCUP00000001867 | Intersectin 2. | SH3 domain containing ring finger 3. | 0.406 |
ITSN2 | STON2 | ENSSCUP00000017407 | ENSSCUP00000010331 | Intersectin 2. | Stonin-2; Belongs to the Stoned B family. | 0.991 |
ITSN2 | SYT17 | ENSSCUP00000017407 | ENSSCUP00000021501 | Intersectin 2. | Synaptotagmin-17. | 0.683 |
ITSN2 | VAMP4 | ENSSCUP00000017407 | ENSSCUP00000007560 | Intersectin 2. | Vesicle-associated membrane protein 4. | 0.980 |
N308_07282 | RIMS2 | ENSSCUP00000016291 | ENSSCUP00000019889 | Ras-related protein Rab-3C. | Regulating synaptic membrane exocytosis 2. | 0.995 |
N308_07282 | SYT17 | ENSSCUP00000016291 | ENSSCUP00000021501 | Ras-related protein Rab-3C. | Synaptotagmin-17. | 0.501 |
N308_07282 | VAMP4 | ENSSCUP00000016291 | ENSSCUP00000007560 | Ras-related protein Rab-3C. | Vesicle-associated membrane protein 4. | 0.550 |
NT5DC3 | SYT17 | ENSSCUP00000024633 | ENSSCUP00000021501 | 5'-nucleotidase domain-containing protein 3. | Synaptotagmin-17. | 0.524 |
RAB3B | RIMS2 | ENSSCUP00000019447 | ENSSCUP00000019889 | Ras-related protein Rab-3B. | Regulating synaptic membrane exocytosis 2. | 0.995 |
RAB3B | SYT17 | ENSSCUP00000019447 | ENSSCUP00000021501 | Ras-related protein Rab-3B. | Synaptotagmin-17. | 0.500 |
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