STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAF11Protein SCAF11. (1178 aa)    
Predicted Functional Partners:
NIPBL
Nipped-B protein.
   
  
 0.745
THOC2
THO complex 2.
   
    0.738
ATRX
Transcriptional regulator ATRX.
   
   0.680
BCLAF1
Bcl-2-associated transcription factor 1.
  
    0.603
SMCHD1
Structural maintenance of chromosomes flexible hinge domain-containing protein 1.
   
    0.578
PNISR
Arginine/serine-rich protein PNISR.
   
  
 0.549
PDS5A
PDS5 cohesin associated factor A.
   
  
 0.520
PBRM1
Protein polybromo-1.
   
    0.508
PCMTD1
Protein-L-isoaspartate O-methyltransferase domain-containing protein 1.
      
 0.503
RSF1
Remodeling and spacing factor 1.
   
    0.495
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.