STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N308_08491Zinc finger CCCH domain-containing protein 6. (728 aa)    
Predicted Functional Partners:
ENSSCUP00000022597
annotation not available
 
     0.927
SYMPK
Symplekin.
   
 0.893
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.892
SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.892
ENSSCUP00000008547
annotation not available
   
 0.891
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.889
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.886
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.885
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.883
NUDT21
Cleavage and polyadenylation specificity factor subunit 5.
    
 0.882
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.