STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN1Protein AMN1. (269 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.809
RBX1
RING-box protein 1.
    
 0.671
CACUL1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.650
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.650
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.650
RNF7
Ring finger protein 7.
    
 0.633
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.616
PSMF1
Proteasome inhibitor PI31 subunit.
     
 0.591
N308_02498
Ubiquitin-40S ribosomal protein S27a.
    
 0.590
ZFAND4
AN1-type zinc finger protein 4.
    
 0.583
Your Current Organism:
Struthio camelus
NCBI taxonomy Id: 441894
Other names: S. camelus australis, Struthio camelus australis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.