STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_064670Extracellular OTU-like cysteine protease, putative. (497 aa)    
Predicted Functional Partners:
TSTA_071310
BZIP domain-containing protein.
    
 0.843
TSTA_038840
CIA30 domain-containing protein.
    
 0.843
TSTA_031890
Ubiquitin (UbiC), putative.
    
 0.843
TSTA_078380
Polyubiquitin UbiD/Ubi4, putative.
    
 0.833
TSTA_090800
NEDD8-like protein (RubA), putative.
    
 0.833
TSTA_087550
Nuclear protein, putative.
    
  0.812
TSTA_018030
Ubiquitin UbiA, putative.
    
  0.812
TSTA_018040
RNA polymerase I specific transcription initiation factor Rrn7, putative.
    
  0.812
TSTA_055810
TRAF-like signal transducer, putative.
    
 0.797
TSTA_083430
Ubiquitin-like protein DskB, putative.
    
 0.641
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.