STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_07187037S ribosomal protein S25, mitochondrial. (264 aa)    
Predicted Functional Partners:
TSTA_065220
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.960
TSTA_005050
37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.957
TSTA_072680
40S ribosomal protein S2, putative.
   
 
 0.955
TSTA_113580
Uncharacterized protein.
   
 
 0.950
TSTA_115120
37S ribosomal protein Rsm24, putative.
   
 
 0.949
TSTA_045540
Uncharacterized protein.
   
 
 0.949
TSTA_069970
37S ribosomal protein S18, putative.
   
 
 0.946
TSTA_120090
Mitochondrial ribosomal protein DAP3, putative.
   
 
 0.944
TSTA_063670
Mitochondrial ribosomal protein L43, putative.
   
   0.940
TSTA_027660
Ribosomal protein S15, putative.
   
 
 0.940
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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