STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_0755803-ketosphinganine reductase (Tsc10), putative. (359 aa)    
Predicted Functional Partners:
TSTA_114580
Serine palmitoyl CoA transferase subunit LcbA.
     
 0.941
TSTA_095830
Sphinganine hydroxylase Sur2, putative; Belongs to the sterol desaturase family.
    
 0.916
TSTA_055290
PAP2 domain protein.
    
 0.915
TSTA_095000
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.914
TSTA_071430
Sphingolipid desaturase, putative.
   
 
 0.912
TSTA_072790
Neutral ceramidase.
     
 0.912
TSTA_075260
Sphingosine kinase (SphK), putative.
     
 0.908
TSTA_076530
Alkaline dihydroceramidase Ydc1, putative.
     
 0.907
TSTA_101020
Uncharacterized protein.
     
 0.907
TSTA_071110
Longevity-assurance protein (LAC1), putative.
     
 0.903
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.