STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_075940RNA polymerase II transcription factor related protein. (644 aa)    
Predicted Functional Partners:
TSTA_067380
Transcription factor TFIIH subunit Tfb4, putative.
    
 0.998
TSTA_120770
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.998
TSTA_045690
RNA polymerase TFIIH complex subunit Ssl1, putative.
    
 0.998
TSTA_086980
TFIIH complex helicase Rad3, putative.
    
 0.997
TSTA_091170
Transcription factor TFIIE complex alpha subunit, putative.
   
 0.997
TSTA_117300
TFIIH complex helicase Ssl2, putative.
   
 0.997
TSTA_015690
CDK-activating kinase assembly factor MAT1.
    
 0.997
TSTA_112430
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.995
TSTA_054600
Cyclin Ccl1, putative.
    
 0.991
TSTA_089710
Serine/threonine protein kinase (Kin28), putative; Belongs to the protein kinase superfamily.
    
 0.990
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.