STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_078760Vacuolar protein sorting-associated protein Vps5, putative. (575 aa)    
Predicted Functional Partners:
TSTA_028430
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.976
TSTA_076290
Vacuolar protein sorting-associated protein 26, putative.
   
 
 0.966
TSTA_073550
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.963
TSTA_054750
Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.
    
 
0.940
TSTA_046930
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.826
vps10
Vacuolar protein sorting/targeting protein 10; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. Executes multiple rounds of sorting by cycling between the late Golgi and a prevacuolar endosome-like compartment (By similarity); Belongs to the VPS10-related sortilin family.
    
 0.815
TSTA_100880
Cytoskeleton assembly control protein Sla2, putative.
   
 0.804
TSTA_033030
Vacuolar sorting receptor (Mrl1), putative.
    
 0.775
TSTA_032600
AP-1 complex subunit gamma.
     
 0.757
TSTA_044110
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.749
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
Server load: low (26%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.