STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_069050F-box protein (Pof7), putative. (543 aa)    
Predicted Functional Partners:
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Essential component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Controls sulfur metabolite repression, probably by mediating the inactivation or degradation of the metR transcription factor (By similarity).
    
 0.972
TSTA_011710
Uncharacterized protein.
    
 0.970
TSTA_093150
SCF ubiquitin ligase subunit CulC, putative; Belongs to the cullin family.
    
 0.935
TSTA_088070
SCF ubiquitin ligase complex subunit CulA, putative; Belongs to the cullin family.
    
 0.935
TSTA_069880
PHD finger and JmjC domain protein, putative.
    
 0.832
TSTA_121910
Ubiquitin ligase subunit HrtA, putative.
    
  0.772
TSTA_078380
Polyubiquitin UbiD/Ubi4, putative.
    
 0.699
TSTA_090800
NEDD8-like protein (RubA), putative.
    
 0.699
TSTA_120220
UV excision repair protein (RadW), putative.
    
 0.683
TSTA_102920
IFRD domain protein.
     
 0.672
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
Server load: low (22%) [HD]