STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_080940HTH CENPB-type domain-containing protein. (372 aa)    
Predicted Functional Partners:
TSTA_117990
2Fe-2S iron-sulfur cluster binding domain protein.
   
 0.646
TSTA_098450
Fungal_trans domain-containing protein.
    
 
 0.590
TSTA_091820
Beta-ketoacyl synthase (Cem1), putative; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.576
TSTA_071340
SUMO conjugating enzyme (UbcI), putative; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.559
TSTA_039410
Mob1 family protein.
    
 
 0.555
TSTA_039180
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.554
TSTA_114430
Pre-mRNA splicing factor, putative.
    
   0.554
TSTA_102960
Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.
    
   0.554
TSTA_072640
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.515
TSTA_020830
D-xylulose kinase.
   
 
 0.466
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.