TSTA_082060 protein (Talaromyces stipitatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TSTA_082060

Coenzyme A synthetase, putative. (793 aa)

Predicted Functional Partners:

TSTA_030810

0.927

TSTA_071220

0.790

TSTA_112140

0.790

TSTA_062530

0.759

TSTA_092910

0.759

TSTA_118220

0.759

TSTA_117010

0.759

TSTA_049800

0.759

TSTA_077010

0.735

TSTA_077020

0.735

Your Current Organism:

Talaromyces stipitatus

NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TSTA_030810	TSTA_049800	B8M7T9	B8MLK9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Transcriptional corepressor Cyc8, putative.	0.907
TSTA_030810	TSTA_062530	B8M7T9	B8LXV1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Amidase, putative.	0.907
TSTA_030810	TSTA_077010	B8M7T9	B8LVW8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.952
TSTA_030810	TSTA_077020	B8M7T9	B8LVW9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	ADP-ribosylation factor, putative; Belongs to the small GTPase superfamily. Arf family.	0.952
TSTA_030810	TSTA_082060	B8M7T9	B8M131	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Coenzyme A synthetase, putative.	0.927
TSTA_030810	TSTA_092910	B8M7T9	B8M369	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.907
TSTA_030810	TSTA_117010	B8M7T9	B8MDF2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.907
TSTA_030810	TSTA_118220	B8M7T9	B8M9Q0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	UBA/TS-N domain protein.	0.917
TSTA_049800	TSTA_030810	B8MLK9	B8M7T9	Transcriptional corepressor Cyc8, putative.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.907
TSTA_049800	TSTA_077010	B8MLK9	B8LVW8	Transcriptional corepressor Cyc8, putative.	Uncharacterized protein.	0.652
TSTA_049800	TSTA_077020	B8MLK9	B8LVW9	Transcriptional corepressor Cyc8, putative.	ADP-ribosylation factor, putative; Belongs to the small GTPase superfamily. Arf family.	0.652
TSTA_049800	TSTA_082060	B8MLK9	B8M131	Transcriptional corepressor Cyc8, putative.	Coenzyme A synthetase, putative.	0.759
TSTA_062530	TSTA_030810	B8LXV1	B8M7T9	Amidase, putative.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.907
TSTA_062530	TSTA_077010	B8LXV1	B8LVW8	Amidase, putative.	Uncharacterized protein.	0.662
TSTA_062530	TSTA_077020	B8LXV1	B8LVW9	Amidase, putative.	ADP-ribosylation factor, putative; Belongs to the small GTPase superfamily. Arf family.	0.662
TSTA_062530	TSTA_082060	B8LXV1	B8M131	Amidase, putative.	Coenzyme A synthetase, putative.	0.759
TSTA_071220	TSTA_082060	B8LUE6	B8M131	Sterol carrier protein, putative; Belongs to the thiolase-like superfamily. Thiolase family.	Coenzyme A synthetase, putative.	0.790
TSTA_071220	TSTA_112140	B8LUE6	B8M984	Sterol carrier protein, putative; Belongs to the thiolase-like superfamily. Thiolase family.	Lipid transfer protein, putative.	0.944
TSTA_077010	TSTA_030810	B8LVW8	B8M7T9	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.952
TSTA_077010	TSTA_049800	B8LVW8	B8MLK9	Uncharacterized protein.	Transcriptional corepressor Cyc8, putative.	0.652