STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_088640Membrane-tethered transcription factor (SPT23), putative. (1406 aa)    
Predicted Functional Partners:
TSTA_063270
Cell division control protein Cdc48; Belongs to the AAA ATPase family.
    
 0.910
TSTA_046010
Ubiquitin fusion degradation protein Ufd1, putative.
    
 
 0.888
TSTA_114040
Polyubiquitin binding protein (Doa1/Ufd3), putative.
    
   0.884
TSTA_103630
OTU-like cysteine protease, putative.
    
   0.884
TSTA_039180
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.876
TSTA_121160
Ubiquitin fusion degradation protein (Ufd1), putative.
    
 
 0.811
TSTA_121300
AAA family ATPase, putative.
    
 0.724
TSTA_073520
E3 ubiquitin-protein ligase.
    
 
 0.721
TSTA_020400
Cellular morphogenesis protein (Rax2), putative.
    
 
 0.593
TSTA_027620
Phosphatidate cytidylyltransferase, putative.
    
   0.583
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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