STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_088770GABA permease, putative. (531 aa)    
Predicted Functional Partners:
TSTA_087710
Anthranilate synthase multifunctional protein TrpC, putative.
    
 
 0.470
TSTA_069920
Shikimate 5-dehydrogenase, putative.
    
  0.450
TSTA_071040
Pentafunctional AROM polypeptide, putative.
    
  0.450
aroM
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family.
    
  0.450
TSTA_010510
Repressor protein.
    
  0.450
TSTA_053330
4-hydroxyphenylpyruvate dioxygenase, putative.
    
  0.450
TSTA_053340
Quinate 5-dehydrogenase QutB, putative.
    
  0.450
TSTA_000170
FtsJ domain-containing protein.
    
  0.450
qutR
Quinate repressor protein; Multi-domain repressor protein that negatively regulates transcription of the quinate utilization pathway genes. May mediate its repressor activity by binding directly to the qutA activator protein (By similarity); In the 2nd section; belongs to the type-I 3-dehydroquinase family.
    
  0.450
TSTA_084740
Alpha-amylase, putative.
    
  0.409
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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