STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_094850Regulator of secondary metabolism LaeA. (373 aa)    
Predicted Functional Partners:
TSTA_087060
Histone H3; Belongs to the histone H3 family.
   
 0.711
TSTA_088750
Sexual development activator VeA.
    
 
 0.596
TSTA_124280
Developmental regulator VelB.
    
 
 0.590
TSTA_095730
C2H2 type conidiation transcription factor BrlA.
    
 
 0.589
TSTA_032350
C2H2 transcription factor PacC, putative.
    
 
 0.586
TSTA_039270
C2H2 transcription factor (Crea), putative.
    
 
 0.581
TSTA_035740
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.569
TSTA_048740
Pre-rRNA processing protein Tsr1, putative.
   
  0.556
TSTA_018840
Transcription factor AbaA.
      
 0.542
TSTA_104260
rRNA processing protein Bystin, putative.
   
  0.541
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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