STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_027120LRP16 family protein. (305 aa)    
Predicted Functional Partners:
TSTA_079080
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
  0.697
TSTA_120630
Histone deacetylase HosB.
    
  0.697
TSTA_090500
Histone deacetylase, putative.
    
  0.663
TSTA_036460
Histone deacetylase RpdA/Rpd3.
    
  0.663
TSTA_036910
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.663
TSTA_033670
tRNA splicing 2' phosphotransferase 1.
     
 0.576
TSTA_103820
Histone H2B; Belongs to the histone H2B family.
    
 0.532
TSTA_089650
YT521-B-like splicing factor, putative.
    
 0.525
TSTA_091040
Pyridine nucleotide-disulfide oxidoreductase, putative.
  
 0.509
TSTA_088330
Nitrite reductase NiiA.
  
 0.509
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.