STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_0283502,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. (269 aa)    
Predicted Functional Partners:
TSTA_042390
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative.
  
  
 
0.709
TSTA_055500
N-methyltransferase, putative.
    
 0.700
TSTA_079850
Nitrate reductase, putative.
    
 0.692
TSTA_088340
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.692
TSTA_089300
3'-5' exonuclease/helicase (Wrn), putative.
    
  0.660
TSTA_096400
Tryptophan synthase.
    
 0.659
TSTA_072640
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.657
TSTA_051510
Lysophospholipase.
    
  0.648
TSTA_121650
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.556
TSTA_024770
Uncharacterized protein.
    
 0.525
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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