STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_036680Phenylalanyl-tRNA synthetase beta chain cytoplasmic. (520 aa)    
Predicted Functional Partners:
TSTA_033280
Phenylalanyl-tRNA synthetase, beta subunit.
  
 0.999
TSTA_096650
Phenylalanyl-tRNA synthetase alpha subunit (PodG), putative; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.931
TSTA_094400
40S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS7 family.
   
  
 0.790
TSTA_024840
ATP dependent RNA helicase (Dbp9), putative.
   
   0.784
TSTA_068250
Methionine-tRNA synthetase, putative.
   
 
 0.774
TSTA_093070
DNA polymerase V, putative.
   
    0.764
TSTA_079380
Deoxyhypusine synthase, putative.
  
  
 0.759
TSTA_121780
25S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family.
  
  
 0.747
TSTA_048310
Uncharacterized protein.
  
  
 0.747
TSTA_066940
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.741
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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