STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_037330SH3 domain protein. (1152 aa)    
Predicted Functional Partners:
TSTA_112210
RanBP1 domain protein.
   
 0.996
TSTA_083140
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.893
TSTA_039060
Non-repetitive nucleoporin, putative.
   
 0.855
TSTA_068670
Nuclear pore complex subunit Nup159, putative.
    
 0.848
TSTA_013920
mRNA splicing factor (Prp17), putative.
    
 0.844
TSTA_075180
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.843
TSTA_121190
Nuclear pore protein (Nic96), putative.
   
 0.842
TSTA_116540
Transcriptional regulator Cwf13/SkiP, putative.
    
 0.842
TSTA_063690
Cell cycle control protein (Cwf8), putative.
    
 0.839
TSTA_067040
DNA repair and transcription protein (Xab2), putative.
    
 0.837
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.