STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_113000Protein transport protein Sec24, putative. (925 aa)    
Predicted Functional Partners:
TSTA_019530
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
TSTA_070680
Nuclear pore complex subunit (SEC13), putative; Belongs to the WD repeat SEC13 family.
   
 0.998
TSTA_096710
Protein transport protein (SEC31), putative.
   
 0.998
TSTA_025950
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.998
TSTA_035200
Sec23/Sec24 family protein.
   
0.996
TSTA_026070
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.990
TSTA_043490
Uncharacterized protein.
   
 0.981
TSTA_019000
Small monomeric GTPase SarA, putative; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.958
TSTA_019010
Uncharacterized protein.
   
 0.958
TSTA_123530
ER-Golgi SNARE complex subunit (Sed5), putative.
    
 0.921
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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