STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_122910Peptidyl-prolyl cis-trans isomerase, putative. (632 aa)    
Predicted Functional Partners:
TSTA_021570
Cell cycle control protein (Cwf22), putative.
   
  0.955
TSTA_026730
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
0.944
TSTA_013920
mRNA splicing factor (Prp17), putative.
   
  0.942
TSTA_006430
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
  
0.938
TSTA_044820
SYF2 splicing factor family protein.
    
 0.928
TSTA_017780
mRNA splicing factor RNA helicase (Prp16), putative.
   
  0.923
TSTA_071700
ATP dependent RNA helicase (Dob1), putative.
   
 0.908
TSTA_054610
WD repeat protein.
   
  0.905
TSTA_096700
Peptidyl prolyl cis-trans isomerase Cyclophilin, putative.
   
 0.903
TSTA_115540
mRNA splicing protein Yju2.
    
  0.900
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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