STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_1247804-hydroxyphenylpyruvate dioxygenase, putative. (116 aa)    
Predicted Functional Partners:
TSTA_113230
3-methylcrotonyl-CoA carboxylase, beta subunit (MccB), putative.
  
 
 0.965
TSTA_061060
Homogentisate 1,2-dioxygenase, putative.
  
 0.925
TSTA_065620
Homogentisate 1,2-dioxygenase (HmgA), putative.
  
 0.925
TSTA_018090
Homogentisate 1,2-dioxygenase, putative.
  
 0.925
TSTA_056750
Homogentisate 1,2-dioxygenase, putative.
  
 0.925
TSTA_081300
Urea amidolyase, putative.
  
 
 0.881
TSTA_028730
Amidase, putative.
  
 
 0.881
TSTA_096400
Tryptophan synthase.
   
 
 0.854
TSTA_113290
3-methylcrotonyl-CoA carboxylase subunit alpha (MccA), putative.
  
 
 0.830
TSTA_078320
Aspartate aminotransferase.
  
 
 0.828
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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