STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_126790Gag/polymerase/env polyprotein, putative. (562 aa)    
Predicted Functional Partners:
TSTA_072390
Retrovirus polyprotein, putative.
  
     0.540
TSTA_035640
Retrovirus polyprotein, putative.
  
     0.540
TSTA_008910
Gag/polymerase/env polyprotein, putative.
  
     0.537
TSTA_121470
Retrovirus polyprotein, putative.
  
     0.534
TSTA_107330
Retrovirus polyprotein, putative.
  
     0.533
TSTA_106080
Retrovirus polyprotein, putative.
  
     0.532
TSTA_070290
Retrovirus polyprotein, putative.
  
     0.531
TSTA_126940
Gag/polymerase/env polyprotein, putative.
  
     0.530
TSTA_051820
Retrovirus polyprotein, putative.
  
     0.528
TSTA_103920
Retrovirus polyprotein, putative.
  
     0.523
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.