STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_113660BTB domain-containing protein. (396 aa)    
Predicted Functional Partners:
TSTA_093150
SCF ubiquitin ligase subunit CulC, putative; Belongs to the cullin family.
   
 0.850
TSTA_088070
SCF ubiquitin ligase complex subunit CulA, putative; Belongs to the cullin family.
   
 0.850
TSTA_071340
SUMO conjugating enzyme (UbcI), putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.754
TSTA_121910
Ubiquitin ligase subunit HrtA, putative.
    
 0.721
TSTA_121170
Proteasome regulatory particle subunit Rpt6, putative; Belongs to the AAA ATPase family.
   
  0.698
TSTA_054580
Proteasome regulatory particle subunit Rpt2, putative; Belongs to the AAA ATPase family.
   
  0.698
TSTA_003680
Proteasome regulatory particle subunit Rpt1, putative; Belongs to the AAA ATPase family.
   
  0.682
TSTA_078380
Polyubiquitin UbiD/Ubi4, putative.
    
  0.661
TSTA_090800
NEDD8-like protein (RubA), putative.
    
  0.661
TSTA_071310
BZIP domain-containing protein.
    
  0.651
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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