Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TSTA_004420 | TSTA_004660 | B8MTI8 | B8MTL4 | DUF1767 domain-containing protein. | Exonuclease, putative. | 0.845 |
TSTA_004420 | TSTA_019830 | B8MTI8 | B8MEP0 | DUF1767 domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.813 |
TSTA_004420 | TSTA_033720 | B8MTI8 | B8M6R0 | DUF1767 domain-containing protein. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.971 |
TSTA_004420 | TSTA_070240 | B8MTI8 | B8LTL9 | DUF1767 domain-containing protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.958 |
TSTA_004420 | TSTA_071510 | B8MTI8 | B8LUI1 | DUF1767 domain-containing protein. | RAD52 DNA repair protein RADC. | 0.883 |
TSTA_004420 | TSTA_074630 | B8MTI8 | B8LW57 | DUF1767 domain-containing protein. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.899 |
TSTA_004420 | TSTA_076440 | B8MTI8 | B8LWG5 | DUF1767 domain-containing protein. | DNA replication helicase Dna2, putative. | 0.828 |
TSTA_004420 | TSTA_088730 | B8MTI8 | B8M2H3 | DUF1767 domain-containing protein. | DNA repair protein (Rad57), putative. | 0.873 |
TSTA_004420 | TSTA_121280 | B8MTI8 | B8MA56 | DUF1767 domain-containing protein. | Inositol kinase kinase (UvsB), putative; Belongs to the PI3/PI4-kinase family. | 0.787 |
TSTA_004420 | TSTA_127100 | B8MTI8 | B8MD39 | DUF1767 domain-containing protein. | Werner syndrome helicase, putative. | 0.822 |
TSTA_004660 | TSTA_004420 | B8MTL4 | B8MTI8 | Exonuclease, putative. | DUF1767 domain-containing protein. | 0.845 |
TSTA_004660 | TSTA_019830 | B8MTL4 | B8MEP0 | Exonuclease, putative. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.989 |
TSTA_004660 | TSTA_033720 | B8MTL4 | B8M6R0 | Exonuclease, putative. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.862 |
TSTA_004660 | TSTA_070240 | B8MTL4 | B8LTL9 | Exonuclease, putative. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.905 |
TSTA_004660 | TSTA_071510 | B8MTL4 | B8LUI1 | Exonuclease, putative. | RAD52 DNA repair protein RADC. | 0.891 |
TSTA_004660 | TSTA_074630 | B8MTL4 | B8LW57 | Exonuclease, putative. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.992 |
TSTA_004660 | TSTA_076440 | B8MTL4 | B8LWG5 | Exonuclease, putative. | DNA replication helicase Dna2, putative. | 0.977 |
TSTA_004660 | TSTA_088730 | B8MTL4 | B8M2H3 | Exonuclease, putative. | DNA repair protein (Rad57), putative. | 0.913 |
TSTA_004660 | TSTA_121280 | B8MTL4 | B8MA56 | Exonuclease, putative. | Inositol kinase kinase (UvsB), putative; Belongs to the PI3/PI4-kinase family. | 0.950 |
TSTA_004660 | TSTA_127100 | B8MTL4 | B8MD39 | Exonuclease, putative. | Werner syndrome helicase, putative. | 0.879 |
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