STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_020230Possible replication factor-a protein. (320 aa)    
Predicted Functional Partners:
TSTA_070240
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
  
 0.999
TSTA_089300
3'-5' exonuclease/helicase (Wrn), putative.
   
 0.999
TSTA_071510
RAD52 DNA repair protein RADC.
    
 0.984
TSTA_121280
Inositol kinase kinase (UvsB), putative; Belongs to the PI3/PI4-kinase family.
   
 0.978
TSTA_102700
Histone H1.
    
 0.977
TSTA_019520
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
   
 0.976
TSTA_004570
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.976
TSTA_005490
DNA replication factor C subunit Rfc4, putative.
   
 0.974
TSTA_113680
Sister chromatid cohesion protein (Eso1), putative.
   
 
 0.969
TSTA_102800
Sister chromatid cohesion acetyltransferase Eco1, putative.
   
 
 0.969
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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