STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSTA_012730DNA mismatch repair protein Msh1, putative. (1004 aa)    
Predicted Functional Partners:
TSTA_036380
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.992
TSTA_067130
DNA mismatch repair protein Mlh1, putative.
 
 0.989
TSTA_124010
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.978
TSTA_004660
Exonuclease, putative.
   
 0.973
TSTA_058430
DNA mismatch repair protein, putative.
 
 0.964
TSTA_056930
DNA mismatch repair protein (Pms1), putative.
 
 0.948
TSTA_046320
Acetamidase/formamidase family protein.
  
 0.923
TSTA_070910
DNA mismatch repair protein (Mlh3), putative.
  
 0.921
TSTA_018950
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.918
TSTA_019020
Vezatin domain-containing protein.
   
 0.918
Your Current Organism:
Talaromyces stipitatus
NCBI taxonomy Id: 441959
Other names: T. stipitatus ATCC 10500, Talaromyces stipitatus ATCC 10500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.